Multivariate analysis of a genome-wide association study in dairy cattle

Multivariate analysis of a genome-wide association study in dairy cattle

Hayes, Ben J., Pryce, Jennie, Chamberlain, Amanda J., Bowman, Phil J. and Goddard, Mike E. (2010). PLoS Genetics, 6 (9) e1001139, e1001139. doi: /journal.pgen.1001139

Bolormaa, S., Pryce, J. E., Hayes, B. J. and Goddard, M. E. (2010). Journal of Dairy Science, 93 (8), 3818-3833. doi: /jds.2009-2980

Robinson, Nick, Li, Xiaoxu and Hayes, Ben (2010). Testing options for the commercialization of abalone selective breeding using bioeconomic simulation modelling. Aquaculture Research, 41 (9), e268-e288. doi: /j.1365-8.x

Pryce, J. E., Bolormaa, S., Chamberlain, A. J., Bowman, P. J., Savin, K., Goddard, M. E. and Hayes, B. J. (2010). A validated genome-wide association study in 2 dairy cattle breeds for milk production and fertility traits using variable length haplotypes. Journal of Dairy Science, 93 (7), 3331-3345. doi: /jds.2009-2893

Olsen, H. G., Hayes, B. J., Kent, M. P., Nome, T., Svendsen, M. and Lien, S. (2010). A genome wide association study for QTL affecting direct and maternal effects of stillbirth and dystocia in cattle. Animal Genetics, 41 (3), 273-280. doi: /j.1365-8.x

Pryce, J. E., Haile-, M., Verbyla, K., Bowman, P. J., Goddard, M. E. and Hayes, B. J. (2010). Genetic markers for lactation persistency in primiparous Australian dairy cows. Journal of Dairy Science, 93 (5), 2202-2214. doi: /jds.2009-2666

MacLeod, I. M., Hayes, B. J., Savin, K. W., Chamberlain, A. J., McPartlan, H. C. and Goddard, M. E. (2010). Power of a genome scan to detect and locate quantitative trait loci in cattle using dense single nucleotide polymorphisms. Journal of Animal Breeding and Genetics, 127 (2), 133-142. doi: /j.1439-1.x

Gopal, Chavali, Gopikrishna, Gopalapillay, Krishna, Gopal, Jahageerdar, Shrinivas S., Rye, Morten, Hayes, Ben J., Paulpandi, Sivagnanam, Kiran, Remanibhaskaran P., Pillai, Subramaniapillai M., Ravichandran, Pitchaiyappan, Ponniah, Alphis G. and Ku). Weight and time of onset of female-superior sexual dimorphism in pond reared Penaeus monodon. Aquaculture, 300 (1-4), 237-239. doi: /j.aquaculture.

MacLeod, I. M., Meuwissen, T. , Hayes, B. J. and Goddard, M. E. (2009). A novel predictor of multilocus haplotype homozygosity: comparison with existing predictors. Genetics Research, 91 (6), 413-426. doi: /S0016672309990358

Usai, M. Graziano, Goddard, Mike E. and Hayes, Ben J. (2009). LASSO with cross-validation for genomic selection. Genetics Research, 91 (6), 427-436. doi: /S0016672309990334

H. E

de Roos, A. P. W., Hayes, B. J. and Goddard, M. E. (2009). Reliability of genomic predictions across multiple populations. Genetics, 183 (4), 1545-1553. doi: /genetics.35

Hayes, B. J., MacLeod, I. M. and Baranski, M. (2009). Sampling strategies for whole genome association studies in aquaculture and outcrossing plant species. Genetics Research, 91 (6), 367-371. doi: /S0016672309990310

Genetic architecture of complex traits and accuracy of genomic prediction: coat colour, milk-fat percentage, and type in Holstein cattle as contrasting model traits

Hayes, Ben J., Bowman, Phillip J., Chamberlain, Amanda C., Verbyla, Klara and Goddard, Mike E. (2009). Accuracy of genomic breeding values in multi-breed dairy cattle populations. Genetics Selection Evolution, 41 (1) 51, 321-329. doi: -9686-41-51

Verbyla, Klara L., Hayes, Ben J., Bowman, Philip. J. and Goddard, Michael E. (2009). Accuracy of genomic selection using stochastic search variable selection in Australian Holstein Friesian dairy cattle. Genetics Research, 91 (5), 307-311. doi: /S0016672309990243

Nilsen, H., Olsen, H. G., Hayes, B., Nome, T., Sehested, E., Svendsen, M., Meuwissen, T. and Lien, S. (2009). Characterization of a QTL region affecting clinical mastitis and protein yield on BTA6. Animal Genetics, 40 (5), 701-712. doi: /j.1365-8.x

Hayes, Ben J., Bowman, Phil J., Chamberlain, Amanda J., Savin, Keith, van Tassell, Curt P., Sonstegard, Tad S. and Goddard, Mike E. (2009). A validated genome wide association study to breed cattle adapted to an environment altered by climate change. PLoS ONE, 4 (8) e6676, e6676. doi: /journal.pone.0006676

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